Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE19013.1 | SFE22179.1 | SAMN02910278_00190 | SAMN02910278_00309 | Glycerophosphoryl diester phosphodiesterase. | Fe-S oxidoreductase. | 0.551 |
SFE19013.1 | SFE63067.1 | SAMN02910278_00190 | SAMN02910278_01289 | Glycerophosphoryl diester phosphodiesterase. | Alpha/beta hydrolase family protein. | 0.409 |
SFE19013.1 | glpK | SAMN02910278_00190 | SAMN02910278_01288 | Glycerophosphoryl diester phosphodiesterase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.691 |
SFE19013.1 | gpsA | SAMN02910278_00190 | SAMN02910278_00105 | Glycerophosphoryl diester phosphodiesterase. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.470 |
SFE19763.1 | SFE26352.1 | SAMN02910278_00214 | SAMN02910278_00464 | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.602 |
SFE19763.1 | glpK | SAMN02910278_00214 | SAMN02910278_01288 | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.967 |
SFE22179.1 | SFE19013.1 | SAMN02910278_00309 | SAMN02910278_00190 | Fe-S oxidoreductase. | Glycerophosphoryl diester phosphodiesterase. | 0.551 |
SFE22179.1 | SFE58531.1 | SAMN02910278_00309 | SAMN02910278_01182 | Fe-S oxidoreductase. | Glycerophosphoryl diester phosphodiesterase. | 0.784 |
SFE22179.1 | glpK | SAMN02910278_00309 | SAMN02910278_01288 | Fe-S oxidoreductase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.699 |
SFE22179.1 | gpsA | SAMN02910278_00309 | SAMN02910278_00105 | Fe-S oxidoreductase. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.407 |
SFE24669.1 | SFE58531.1 | SAMN02910278_00412 | SAMN02910278_01182 | Lysophospholipase, alpha-beta hydrolase superfamily. | Glycerophosphoryl diester phosphodiesterase. | 0.806 |
SFE24669.1 | glpK | SAMN02910278_00412 | SAMN02910278_01288 | Lysophospholipase, alpha-beta hydrolase superfamily. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.855 |
SFE26352.1 | SFE19763.1 | SAMN02910278_00464 | SAMN02910278_00214 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. | 0.602 |
SFE26352.1 | glpK | SAMN02910278_00464 | SAMN02910278_01288 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.939 |
SFE58531.1 | SFE22179.1 | SAMN02910278_01182 | SAMN02910278_00309 | Glycerophosphoryl diester phosphodiesterase. | Fe-S oxidoreductase. | 0.784 |
SFE58531.1 | SFE24669.1 | SAMN02910278_01182 | SAMN02910278_00412 | Glycerophosphoryl diester phosphodiesterase. | Lysophospholipase, alpha-beta hydrolase superfamily. | 0.806 |
SFE58531.1 | SFE63067.1 | SAMN02910278_01182 | SAMN02910278_01289 | Glycerophosphoryl diester phosphodiesterase. | Alpha/beta hydrolase family protein. | 0.806 |
SFE58531.1 | glpK | SAMN02910278_01182 | SAMN02910278_01288 | Glycerophosphoryl diester phosphodiesterase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.792 |
SFE58531.1 | gpsA | SAMN02910278_01182 | SAMN02910278_00105 | Glycerophosphoryl diester phosphodiesterase. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.506 |
SFE63010.1 | SFE63067.1 | SAMN02910278_01287 | SAMN02910278_01289 | Amino acid adenylation domain-containing protein. | Alpha/beta hydrolase family protein. | 0.671 |
page 1 of 3