Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE59763.1 | SFE69071.1 | SAMN02910278_01219 | SAMN02910278_01472 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.472 |
SFE68988.1 | SFE69014.1 | SAMN02910278_01469 | SAMN02910278_01470 | DNA replication protein DnaC. | DnaD and phage-associated domain-containing protein. | 0.965 |
SFE68988.1 | SFE69071.1 | SAMN02910278_01469 | SAMN02910278_01472 | DNA replication protein DnaC. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.613 |
SFE68988.1 | rlmH | SAMN02910278_01469 | SAMN02910278_01471 | DNA replication protein DnaC. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.602 |
SFE69014.1 | SFE68988.1 | SAMN02910278_01470 | SAMN02910278_01469 | DnaD and phage-associated domain-containing protein. | DNA replication protein DnaC. | 0.965 |
SFE69014.1 | SFE69071.1 | SAMN02910278_01470 | SAMN02910278_01472 | DnaD and phage-associated domain-containing protein. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.662 |
SFE69014.1 | rlmH | SAMN02910278_01470 | SAMN02910278_01471 | DnaD and phage-associated domain-containing protein. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.605 |
SFE69071.1 | SFE59763.1 | SAMN02910278_01472 | SAMN02910278_01219 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.472 |
SFE69071.1 | SFE68988.1 | SAMN02910278_01472 | SAMN02910278_01469 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | DNA replication protein DnaC. | 0.613 |
SFE69071.1 | SFE69014.1 | SAMN02910278_01472 | SAMN02910278_01470 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | DnaD and phage-associated domain-containing protein. | 0.662 |
SFE69071.1 | SFE69105.1 | SAMN02910278_01472 | SAMN02910278_01473 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | Rubredoxin. | 0.433 |
SFE69071.1 | rlmH | SAMN02910278_01472 | SAMN02910278_01471 | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.790 |
SFE69105.1 | SFE69071.1 | SAMN02910278_01473 | SAMN02910278_01472 | Rubredoxin. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.433 |
SFE69105.1 | rlmH | SAMN02910278_01473 | SAMN02910278_01471 | Rubredoxin. | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.426 |
rlmH | SFE68988.1 | SAMN02910278_01471 | SAMN02910278_01469 | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | DNA replication protein DnaC. | 0.602 |
rlmH | SFE69014.1 | SAMN02910278_01471 | SAMN02910278_01470 | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | DnaD and phage-associated domain-containing protein. | 0.605 |
rlmH | SFE69071.1 | SAMN02910278_01471 | SAMN02910278_01472 | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Phosphoribosyl 1,2-cyclic phosphodiesterase. | 0.790 |
rlmH | SFE69105.1 | SAMN02910278_01471 | SAMN02910278_01473 | 23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | Rubredoxin. | 0.426 |