node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplD | SAMN02910278_01556 | SAMN02910278_01246 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.998 |
rplA | rplJ | SAMN02910278_01556 | SAMN02910278_01554 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplA | rplK | SAMN02910278_01556 | SAMN02910278_01557 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplL | SAMN02910278_01556 | SAMN02910278_01553 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.998 |
rplA | rplM | SAMN02910278_01556 | SAMN02910278_01194 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplA | rplR | SAMN02910278_01556 | SAMN02910278_01231 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplA | rplV | SAMN02910278_01556 | SAMN02910278_01242 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplA | rplW | SAMN02910278_01556 | SAMN02910278_01245 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplA | rpmC | SAMN02910278_01556 | SAMN02910278_01239 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rplA | rpmD | SAMN02910278_01556 | SAMN02910278_01229 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L30. | 0.999 |
rplD | rplA | SAMN02910278_01246 | SAMN02910278_01556 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.998 |
rplD | rplJ | SAMN02910278_01246 | SAMN02910278_01554 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplD | rplK | SAMN02910278_01246 | SAMN02910278_01557 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.994 |
rplD | rplL | SAMN02910278_01246 | SAMN02910278_01553 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.994 |
rplD | rplM | SAMN02910278_01246 | SAMN02910278_01194 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplD | rplR | SAMN02910278_01246 | SAMN02910278_01231 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rplD | rplV | SAMN02910278_01246 | SAMN02910278_01242 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.999 |
rplD | rplW | SAMN02910278_01246 | SAMN02910278_01245 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplD | rpmC | SAMN02910278_01246 | SAMN02910278_01239 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rplD | rpmD | SAMN02910278_01246 | SAMN02910278_01229 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L30. | 0.998 |