AWZ03_014103 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_014103

Uncharacterized protein. (187 aa)

Predicted Functional Partners:

AWZ03_001892

0.724

AWZ03_009090

0.678

AWZ03_008826

0.666

AWZ03_008010

0.547

LSM4

0.441

AWZ03_000214

0.432

AWZ03_005373

0.430

AWZ03_005621

0.422

AWZ03_003906

0.415

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_000214	AWZ03_001892	A0A484BX47	A0A484BUC8	Protein kinase domain-containing protein.	MPN domain-containing protein.	0.915
AWZ03_000214	AWZ03_003906	A0A484BX47	A0A484BLQ7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.654
AWZ03_000214	AWZ03_005373	A0A484BX47	A0A484BHG4	Protein kinase domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.614
AWZ03_000214	AWZ03_005621	A0A484BX47	A0A484BGU1	Protein kinase domain-containing protein.	Sm domain-containing protein.	0.436
AWZ03_000214	AWZ03_008010	A0A484BX47	A0A484BA77	Protein kinase domain-containing protein.	Nop domain-containing protein.	0.899
AWZ03_000214	AWZ03_008826	A0A484BX47	A0A484B9Q9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.719
AWZ03_000214	AWZ03_009090	A0A484BX47	A0A484B8B2	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.708
AWZ03_000214	AWZ03_014103	A0A484BX47	A0A484AS27	Protein kinase domain-containing protein.	Uncharacterized protein.	0.432
AWZ03_000214	LSM4	A0A484BX47	A0A484BF10	Protein kinase domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.614
AWZ03_001892	AWZ03_000214	A0A484BUC8	A0A484BX47	MPN domain-containing protein.	Protein kinase domain-containing protein.	0.915
AWZ03_001892	AWZ03_003906	A0A484BUC8	A0A484BLQ7	MPN domain-containing protein.	Uncharacterized protein.	0.988
AWZ03_001892	AWZ03_005373	A0A484BUC8	A0A484BHG4	MPN domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.981
AWZ03_001892	AWZ03_005621	A0A484BUC8	A0A484BGU1	MPN domain-containing protein.	Sm domain-containing protein.	0.926
AWZ03_001892	AWZ03_008010	A0A484BUC8	A0A484BA77	MPN domain-containing protein.	Nop domain-containing protein.	0.981
AWZ03_001892	AWZ03_008826	A0A484BUC8	A0A484B9Q9	MPN domain-containing protein.	Uncharacterized protein.	0.981
AWZ03_001892	AWZ03_009090	A0A484BUC8	A0A484B8B2	MPN domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
AWZ03_001892	AWZ03_014103	A0A484BUC8	A0A484AS27	MPN domain-containing protein.	Uncharacterized protein.	0.724
AWZ03_001892	LSM4	A0A484BUC8	A0A484BF10	MPN domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.927
AWZ03_003906	AWZ03_000214	A0A484BLQ7	A0A484BX47	Uncharacterized protein.	Protein kinase domain-containing protein.	0.654
AWZ03_003906	AWZ03_001892	A0A484BLQ7	A0A484BUC8	Uncharacterized protein.	MPN domain-containing protein.	0.988