STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_014325Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
AWZ03_012612
NTF2 domain-containing protein.
    
 0.871
AWZ03_005999
RRM domain-containing protein.
    
 0.867
AWZ03_013032
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
   
 0.864
AWZ03_011330
Uncharacterized protein.
   
 0.840
AWZ03_004250
WD_REPEATS_REGION domain-containing protein.
    
 0.803
AWZ03_004969
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.785
AWZ03_007139
TPR_MLP1_2 domain-containing protein.
   
 0.781
AWZ03_002824
Nsp1_C domain-containing protein.
    
 0.775
AWZ03_005990
Peptidase S59 domain-containing protein.
    
 0.769
AWZ03_011261
Uncharacterized protein.
    
 
 0.756
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.