AWZ03_014635 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_014635

DUF4766 domain-containing protein. (396 aa)

Predicted Functional Partners:

AWZ03_012617

0.839

AWZ03_010124

0.794

AWZ03_005363

0.665

AWZ03_008756

0.635

AWZ03_011300

0.634

AWZ03_010250

0.634

AWZ03_011593

0.600

AWZ03_007399

0.575

AWZ03_002651

0.563

AWZ03_002315

0.552

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_002315	AWZ03_014635	A0A484BR36	A0A484AS88	Uncharacterized protein.	DUF4766 domain-containing protein.	0.552
AWZ03_002651	AWZ03_005363	A0A484BQ74	A0A484BHF4	Uncharacterized protein.	EHD_N domain-containing protein.	0.550
AWZ03_002651	AWZ03_007399	A0A484BQ74	A0A484BEG4	Uncharacterized protein.	Calreticulin.	0.691
AWZ03_002651	AWZ03_014635	A0A484BQ74	A0A484AS88	Uncharacterized protein.	DUF4766 domain-containing protein.	0.563
AWZ03_005363	AWZ03_002651	A0A484BHF4	A0A484BQ74	EHD_N domain-containing protein.	Uncharacterized protein.	0.550
AWZ03_005363	AWZ03_007399	A0A484BHF4	A0A484BEG4	EHD_N domain-containing protein.	Calreticulin.	0.699
AWZ03_005363	AWZ03_014635	A0A484BHF4	A0A484AS88	EHD_N domain-containing protein.	DUF4766 domain-containing protein.	0.665
AWZ03_007399	AWZ03_002651	A0A484BEG4	A0A484BQ74	Calreticulin.	Uncharacterized protein.	0.691
AWZ03_007399	AWZ03_005363	A0A484BEG4	A0A484BHF4	Calreticulin.	EHD_N domain-containing protein.	0.699
AWZ03_007399	AWZ03_014635	A0A484BEG4	A0A484AS88	Calreticulin.	DUF4766 domain-containing protein.	0.575
AWZ03_008756	AWZ03_014635	A0A484B922	A0A484AS88	Uncharacterized protein.	DUF4766 domain-containing protein.	0.635
AWZ03_010124	AWZ03_012617	A0A484B3K0	A0A484AY93	Uncharacterized protein.	Homeobox domain-containing protein.	0.681
AWZ03_010124	AWZ03_014635	A0A484B3K0	A0A484AS88	Uncharacterized protein.	DUF4766 domain-containing protein.	0.794
AWZ03_010250	AWZ03_014635	A0A484B667	A0A484AS88	Uncharacterized protein.	DUF4766 domain-containing protein.	0.634
AWZ03_011300	AWZ03_014635	A0A484B396	A0A484AS88	Uncharacterized protein.	DUF4766 domain-containing protein.	0.634
AWZ03_011593	AWZ03_014635	A0A484AZT0	A0A484AS88	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]	DUF4766 domain-containing protein.	0.600
AWZ03_012617	AWZ03_010124	A0A484AY93	A0A484B3K0	Homeobox domain-containing protein.	Uncharacterized protein.	0.681
AWZ03_012617	AWZ03_014635	A0A484AY93	A0A484AS88	Homeobox domain-containing protein.	DUF4766 domain-containing protein.	0.839
AWZ03_014635	AWZ03_002315	A0A484AS88	A0A484BR36	DUF4766 domain-containing protein.	Uncharacterized protein.	0.552
AWZ03_014635	AWZ03_002651	A0A484AS88	A0A484BQ74	DUF4766 domain-containing protein.	Uncharacterized protein.	0.563