Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_014329Uncharacterized protein. (172 aa)    
Predicted Functional Partners:
AWZ03_004052
FoP_duplication domain-containing protein.
   
 
 0.849
AWZ03_012137
RRM domain-containing protein.
   
 
 0.828
AWZ03_012465
Uncharacterized protein.
   
    0.812
AWZ03_013057
Small nuclear ribonucleoprotein G.
   
    0.810
AWZ03_003198
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
  
 0.778
AWZ03_001896
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.755
AWZ03_005373
Small nuclear ribonucleoprotein Sm D2.
   
   0.753
AWZ03_008924
Uncharacterized protein.
   
   0.724
AWZ03_005999
RRM domain-containing protein.
   
 
 0.706
AWZ03_000626
C2H2-type domain-containing protein.
    
 
 0.675
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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