AWZ03_015047 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_015047

Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family. (205 aa)

Predicted Functional Partners:

AWZ03_014749

0.992

AWZ03_001703

0.940

AWZ03_010875

0.939

AWZ03_011177

0.936

AWZ03_014502

0.921

AWZ03_015102

0.919

AWZ03_015334

0.916

AWZ03_005337

0.874

AWZ03_005336

0.874

AWZ03_002438

0.608

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_001703	AWZ03_014749	A0A484BTJ3	A0A484ASI3	Uncharacterized protein; Belongs to the peptidase S1 family.	GH16 domain-containing protein.	0.964
AWZ03_001703	AWZ03_015047	A0A484BTJ3	A0A484ASF2	Uncharacterized protein; Belongs to the peptidase S1 family.	Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.	0.940
AWZ03_001703	AWZ03_015102	A0A484BTJ3	A0A484APH4	Uncharacterized protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.900
AWZ03_001703	AWZ03_015334	A0A484BTJ3	A0A484ANG5	Uncharacterized protein; Belongs to the peptidase S1 family.	PGRP domain-containing protein.	0.900
AWZ03_002438	AWZ03_014749	A0A484BT79	A0A484ASI3	CBM39 domain-containing protein.	GH16 domain-containing protein.	0.550
AWZ03_002438	AWZ03_015047	A0A484BT79	A0A484ASF2	CBM39 domain-containing protein.	Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.	0.608
AWZ03_005336	AWZ03_005337	A0A484BK86	A0A484BIX3	P4Hc domain-containing protein.	Uncharacterized protein.	0.407
AWZ03_005336	AWZ03_010875	A0A484BK86	A0A484B268	P4Hc domain-containing protein.	Uncharacterized protein.	0.954
AWZ03_005336	AWZ03_011177	A0A484BK86	A0A484B0L5	P4Hc domain-containing protein.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.955
AWZ03_005336	AWZ03_014502	A0A484BK86	A0A484AQX3	P4Hc domain-containing protein.	Uncharacterized protein.	0.959
AWZ03_005336	AWZ03_015047	A0A484BK86	A0A484ASF2	P4Hc domain-containing protein.	Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.	0.874
AWZ03_005337	AWZ03_005336	A0A484BIX3	A0A484BK86	Uncharacterized protein.	P4Hc domain-containing protein.	0.407
AWZ03_005337	AWZ03_010875	A0A484BIX3	A0A484B268	Uncharacterized protein.	Uncharacterized protein.	0.969
AWZ03_005337	AWZ03_011177	A0A484BIX3	A0A484B0L5	Uncharacterized protein.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.970
AWZ03_005337	AWZ03_014502	A0A484BIX3	A0A484AQX3	Uncharacterized protein.	Uncharacterized protein.	0.972
AWZ03_005337	AWZ03_015047	A0A484BIX3	A0A484ASF2	Uncharacterized protein.	Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.	0.874
AWZ03_010875	AWZ03_005336	A0A484B268	A0A484BK86	Uncharacterized protein.	P4Hc domain-containing protein.	0.954
AWZ03_010875	AWZ03_005337	A0A484B268	A0A484BIX3	Uncharacterized protein.	Uncharacterized protein.	0.969
AWZ03_010875	AWZ03_011177	A0A484B268	A0A484B0L5	Uncharacterized protein.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.999
AWZ03_010875	AWZ03_014502	A0A484B268	A0A484AQX3	Uncharacterized protein.	Uncharacterized protein.	0.999