Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_014857RT_RNaseH domain-containing protein. (128 aa)    
Predicted Functional Partners:
AWZ03_014333
Reverse transcriptase domain-containing protein.
  
     0.533
AWZ03_015413
RT_RNaseH domain-containing protein.
  
     0.532
AWZ03_015274
Reverse transcriptase domain-containing protein.
  
     0.531
AWZ03_015378
Reverse transcriptase domain-containing protein.
  
     0.531
AWZ03_015326
Uncharacterized protein.
  
     0.527
AWZ03_014667
Reverse transcriptase domain-containing protein.
  
     0.525
AWZ03_015481
Reverse transcriptase domain-containing protein.
  
     0.517
AWZ03_014789
Integrase catalytic domain-containing protein.
 
     0.501
AWZ03_014960
Integrase catalytic domain-containing protein.
  
     0.451
AWZ03_015438
Integrase_H2C2 domain-containing protein.
  
     0.447
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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