AWZ03_013375 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_013375

Uncharacterized protein. (362 aa)

Predicted Functional Partners:

AWZ03_008036

0.977

AWZ03_003384

0.967

AWZ03_001845

0.952

AWZ03_006295

0.949

AWZ03_009238

0.943

AWZ03_006752

0.928

AWZ03_007459

0.920

AWZ03_006169

0.894

AWZ03_002569

0.819

AWZ03_009690

0.814

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_001845	AWZ03_006295	A0A484BV43	A0A484BGB9	CDT1 domain-containing protein.	S4 RNA-binding domain-containing protein.	0.663
AWZ03_001845	AWZ03_006752	A0A484BV43	A0A484BDR2	CDT1 domain-containing protein.	Uncharacterized protein.	0.947
AWZ03_001845	AWZ03_007459	A0A484BV43	A0A484BB89	CDT1 domain-containing protein.	Uncharacterized protein.	0.451
AWZ03_001845	AWZ03_013375	A0A484BV43	A0A484AV01	CDT1 domain-containing protein.	Uncharacterized protein.	0.952
AWZ03_002569	AWZ03_003384	A0A484BQG9	A0A484BN51	Uncharacterized protein.	Uncharacterized protein.	0.674
AWZ03_002569	AWZ03_007459	A0A484BQG9	A0A484BB89	Uncharacterized protein.	Uncharacterized protein.	0.867
AWZ03_002569	AWZ03_008036	A0A484BQG9	A0A484BC11	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.862
AWZ03_002569	AWZ03_009238	A0A484BQG9	A0A484B6M5	Uncharacterized protein.	Uncharacterized protein.	0.756
AWZ03_002569	AWZ03_013375	A0A484BQG9	A0A484AV01	Uncharacterized protein.	Uncharacterized protein.	0.819
AWZ03_003384	AWZ03_002569	A0A484BN51	A0A484BQG9	Uncharacterized protein.	Uncharacterized protein.	0.674
AWZ03_003384	AWZ03_006169	A0A484BN51	A0A484BI53	Uncharacterized protein.	Uncharacterized protein.	0.969
AWZ03_003384	AWZ03_008036	A0A484BN51	A0A484BC11	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.994
AWZ03_003384	AWZ03_009238	A0A484BN51	A0A484B6M5	Uncharacterized protein.	Uncharacterized protein.	0.977
AWZ03_003384	AWZ03_009690	A0A484BN51	A0A484B5G2	Uncharacterized protein.	Uncharacterized protein.	0.893
AWZ03_003384	AWZ03_013375	A0A484BN51	A0A484AV01	Uncharacterized protein.	Uncharacterized protein.	0.967
AWZ03_006169	AWZ03_003384	A0A484BI53	A0A484BN51	Uncharacterized protein.	Uncharacterized protein.	0.969
AWZ03_006169	AWZ03_008036	A0A484BI53	A0A484BC11	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.925
AWZ03_006169	AWZ03_009238	A0A484BI53	A0A484B6M5	Uncharacterized protein.	Uncharacterized protein.	0.921
AWZ03_006169	AWZ03_009690	A0A484BI53	A0A484B5G2	Uncharacterized protein.	Uncharacterized protein.	0.855
AWZ03_006169	AWZ03_013375	A0A484BI53	A0A484AV01	Uncharacterized protein.	Uncharacterized protein.	0.894