Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_013357RRM domain-containing protein. (1994 aa)    
Predicted Functional Partners:
AWZ03_009977
Uncharacterized protein.
    
 0.778
AWZ03_000501
J domain-containing protein.
    
 
 0.697
AWZ03_009243
Uncharacterized protein.
    
  0.549
AWZ03_010433
Protein kinase domain-containing protein.
      
 0.548
AWZ03_001365
Uncharacterized protein.
    
 
 0.448
AWZ03_013365
Uncharacterized protein.
    
 0.418
AWZ03_013354
Uncharacterized protein.
 
     0.417
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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