AWZ03_012348 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_012348

Uncharacterized protein. (1802 aa)

Predicted Functional Partners:

AWZ03_007739

0.944

AWZ03_011352

0.934

AWZ03_007527

0.931

AWZ03_004946

0.918

AWZ03_004677

0.881

AWZ03_013493

0.828

AWZ03_004555

0.802

AWZ03_001939

0.796

AWZ03_000503

0.793

AWZ03_001405

0.773

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_000503	AWZ03_001405	A0A484BY26	A0A484BTY6	Uncharacterized protein.	Arrestin_C domain-containing protein.	0.475
AWZ03_000503	AWZ03_001939	A0A484BY26	A0A484BRR1	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.467
AWZ03_000503	AWZ03_004677	A0A484BY26	A0A484BJL5	Uncharacterized protein.	Uncharacterized protein.	0.959
AWZ03_000503	AWZ03_004946	A0A484BY26	A0A484BIM4	Uncharacterized protein.	Uncharacterized protein.	0.992
AWZ03_000503	AWZ03_007527	A0A484BY26	A0A484BBH7	Uncharacterized protein.	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	0.999
AWZ03_000503	AWZ03_007739	A0A484BY26	A0A484BB47	Uncharacterized protein.	UMA domain-containing protein.	0.988
AWZ03_000503	AWZ03_011352	A0A484BY26	A0A484B0P0	Uncharacterized protein.	Uncharacterized protein.	0.583
AWZ03_000503	AWZ03_012348	A0A484BY26	A0A484AX83	Uncharacterized protein.	Uncharacterized protein.	0.793
AWZ03_000503	AWZ03_013493	A0A484BY26	A0A484ATS4	Uncharacterized protein.	Uncharacterized protein.	0.432
AWZ03_001405	AWZ03_000503	A0A484BTY6	A0A484BY26	Arrestin_C domain-containing protein.	Uncharacterized protein.	0.475
AWZ03_001405	AWZ03_012348	A0A484BTY6	A0A484AX83	Arrestin_C domain-containing protein.	Uncharacterized protein.	0.773
AWZ03_001405	AWZ03_013493	A0A484BTY6	A0A484ATS4	Arrestin_C domain-containing protein.	Uncharacterized protein.	0.470
AWZ03_001939	AWZ03_000503	A0A484BRR1	A0A484BY26	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.467
AWZ03_001939	AWZ03_004946	A0A484BRR1	A0A484BIM4	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.799
AWZ03_001939	AWZ03_007527	A0A484BRR1	A0A484BBH7	Receptor protein-tyrosine kinase.	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	0.906
AWZ03_001939	AWZ03_011352	A0A484BRR1	A0A484B0P0	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.999
AWZ03_001939	AWZ03_012348	A0A484BRR1	A0A484AX83	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.796
AWZ03_001939	AWZ03_013493	A0A484BRR1	A0A484ATS4	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.950
AWZ03_004555	AWZ03_012348	A0A484BM06	A0A484AX83	Uncharacterized protein; Belongs to the peptidase M16 family.	Uncharacterized protein.	0.802
AWZ03_004677	AWZ03_000503	A0A484BJL5	A0A484BY26	Uncharacterized protein.	Uncharacterized protein.	0.959