STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_012558Uncharacterized protein. (1256 aa)    
Predicted Functional Partners:
AWZ03_013117
Smg4_UPF3 domain-containing protein.
   
 0.999
AWZ03_006712
RRM domain-containing protein.
    
 0.994
AWZ03_004646
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.987
AWZ03_011372
UPF1-type domain-containing protein.
   
 0.953
AWZ03_011206
Uncharacterized protein.
   
 0.953
AWZ03_009101
PWI domain-containing protein.
    
 
 0.947
AWZ03_012007
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.939
AWZ03_012009
Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
   
 
 0.911
AWZ03_003449
RRM domain-containing protein.
    
 0.887
AWZ03_004306
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.879
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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