AWZ03_012483 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_012483

UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)

Predicted Functional Partners:

AWZ03_000948

0.996

AWZ03_013361

0.962

AWZ03_012639

0.949

AWZ03_009025

0.948

AWZ03_007743

0.935

AWZ03_006312

0.935

AWZ03_006862

0.933

AWZ03_014572

0.900

AWZ03_008987

0.874

AWZ03_000092

0.874

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_000092	AWZ03_000948	A0A484BWS0	A0A484BXP3	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.932
AWZ03_000092	AWZ03_006312	A0A484BWS0	A0A484BF18	Uncharacterized protein.	Uncharacterized protein.	0.562
AWZ03_000092	AWZ03_006862	A0A484BWS0	A0A484BEH3	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.994
AWZ03_000092	AWZ03_007743	A0A484BWS0	A0A484BAM6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.991
AWZ03_000092	AWZ03_009025	A0A484BWS0	A0A484B6Z5	Uncharacterized protein.	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	0.947
AWZ03_000092	AWZ03_012483	A0A484BWS0	A0A484AXG2	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.874
AWZ03_000092	AWZ03_012639	A0A484BWS0	A0A484AZC4	Uncharacterized protein.	Uncharacterized protein.	0.902
AWZ03_000092	AWZ03_013361	A0A484BWS0	A0A484AUS7	Uncharacterized protein.	RING-type domain-containing protein.	0.658
AWZ03_000092	AWZ03_014572	A0A484BWS0	A0A484AQM3	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.874
AWZ03_000948	AWZ03_000092	A0A484BXP3	A0A484BWS0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.932
AWZ03_000948	AWZ03_006312	A0A484BXP3	A0A484BF18	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.667
AWZ03_000948	AWZ03_006862	A0A484BXP3	A0A484BEH3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.963
AWZ03_000948	AWZ03_007743	A0A484BXP3	A0A484BAM6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.971
AWZ03_000948	AWZ03_008987	A0A484BXP3	A0A484B9U0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.932
AWZ03_000948	AWZ03_009025	A0A484BXP3	A0A484B6Z5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	0.820
AWZ03_000948	AWZ03_012483	A0A484BXP3	A0A484AXG2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.996
AWZ03_000948	AWZ03_012639	A0A484BXP3	A0A484AZC4	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.727
AWZ03_000948	AWZ03_013361	A0A484BXP3	A0A484AUS7	UBIQUITIN_CONJUGAT_2 domain-containing protein.	RING-type domain-containing protein.	0.603
AWZ03_000948	AWZ03_014572	A0A484BXP3	A0A484AQM3	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.996
AWZ03_006312	AWZ03_000092	A0A484BF18	A0A484BWS0	Uncharacterized protein.	Uncharacterized protein.	0.562