STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_012451COMM domain-containing protein. (212 aa)    
Predicted Functional Partners:
AWZ03_001605
COMM domain-containing protein.
  
 
 0.943
AWZ03_000498
Uncharacterized protein.
    
 0.904
AWZ03_010446
COMM domain-containing protein.
   
 0.901
AWZ03_002292
Uncharacterized protein.
    
 0.846
AWZ03_010548
KOG2701 domain-containing protein.
    
 
 0.800
AWZ03_010186
Uncharacterized protein.
    
 
 0.788
AWZ03_006306
COMM domain-containing protein.
    
 0.787
AWZ03_001285
Uncharacterized protein.
    
 
 0.782
AWZ03_007036
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.578
AWZ03_005793
Ubiquitin-like domain-containing protein.
   
 
  0.526
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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