AWZ03_010312 protein (Drosophila navojoa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AWZ03_010312

Thioredoxin domain-containing protein. (165 aa)

Predicted Functional Partners:

AWZ03_003659

0.971

AWZ03_003674

0.971

AWZ03_002742

0.971

AWZ03_002914

0.971

AWZ03_009541

0.925

AWZ03_013033

0.873

AWZ03_001542

0.871

AWZ03_006626

0.857

AWZ03_008424

0.845

AWZ03_012471

0.844

Your Current Organism:

Drosophila navojoa

NCBI taxonomy Id: 7232
Other names: D. navojoa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AWZ03_001542	AWZ03_010312	A0A484BUG6	A0A484B609	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.871
AWZ03_001542	AWZ03_013033	A0A484BUG6	A0A484AY62	Thioredoxin domain-containing protein.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.970
AWZ03_002742	AWZ03_003674	A0A484BPT3	A0A484BMD4	MADF domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.971
AWZ03_002742	AWZ03_010312	A0A484BPT3	A0A484B609	MADF domain-containing protein.	Thioredoxin domain-containing protein.	0.971
AWZ03_002914	AWZ03_003659	A0A484BRC4	A0A484BM80	Uncharacterized protein.	Homeobox domain-containing protein.	0.971
AWZ03_002914	AWZ03_003674	A0A484BRC4	A0A484BMD4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.971
AWZ03_002914	AWZ03_010312	A0A484BRC4	A0A484B609	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.971
AWZ03_003659	AWZ03_002914	A0A484BM80	A0A484BRC4	Homeobox domain-containing protein.	Uncharacterized protein.	0.971
AWZ03_003659	AWZ03_010312	A0A484BM80	A0A484B609	Homeobox domain-containing protein.	Thioredoxin domain-containing protein.	0.971
AWZ03_003674	AWZ03_002742	A0A484BMD4	A0A484BPT3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	MADF domain-containing protein.	0.971
AWZ03_003674	AWZ03_002914	A0A484BMD4	A0A484BRC4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.971
AWZ03_003674	AWZ03_009541	A0A484BMD4	A0A484B6Y1	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	DRBM domain-containing protein.	0.924
AWZ03_003674	AWZ03_010312	A0A484BMD4	A0A484B609	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Thioredoxin domain-containing protein.	0.971
AWZ03_006626	AWZ03_010312	A0A484BF60	A0A484B609	Protein kinase domain-containing protein.	Thioredoxin domain-containing protein.	0.857
AWZ03_008424	AWZ03_010312	A0A484B948	A0A484B609	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.845
AWZ03_008424	AWZ03_013033	A0A484B948	A0A484AY62	Thioredoxin domain-containing protein.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.934
AWZ03_009541	AWZ03_003674	A0A484B6Y1	A0A484BMD4	DRBM domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.924
AWZ03_009541	AWZ03_010312	A0A484B6Y1	A0A484B609	DRBM domain-containing protein.	Thioredoxin domain-containing protein.	0.925
AWZ03_010312	AWZ03_001542	A0A484B609	A0A484BUG6	Thioredoxin domain-containing protein.	Thioredoxin domain-containing protein.	0.871
AWZ03_010312	AWZ03_002742	A0A484B609	A0A484BPT3	Thioredoxin domain-containing protein.	MADF domain-containing protein.	0.971