STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWZ03_009945TPT domain-containing protein. (390 aa)    
Predicted Functional Partners:
AWZ03_000514
TPT domain-containing protein.
      
 0.663
AWZ03_004855
TPT domain-containing protein.
      
 0.661
AWZ03_004051
Uncharacterized protein.
    
 
 0.618
AWZ03_000866
TPT domain-containing protein.
      
 0.570
AWZ03_010038
Uncharacterized protein.
      
 0.568
AWZ03_006757
Uncharacterized protein.
      
 0.558
AWZ03_004969
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.558
AWZ03_003612
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
      
 0.544
AWZ03_010219
SANT domain-containing protein.
      
 0.522
AWZ03_006929
NTP_transferase domain-containing protein.
      
 0.520
Your Current Organism:
Drosophila navojoa
NCBI taxonomy Id: 7232
Other names: D. navojoa
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