STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_3214RNA helicase. (1456 aa)    
Predicted Functional Partners:
THOM_0277
Putative Heat shock protein DnaJ, Molecular chaperone, Hsp40, DnaJ, Sec63 domain protein.
     
 0.966
THOM_2434
U5 snRNP spliceosome subunit.
   
 0.957
THOM_2018
U5 snRNP-specific protein.
   
 0.929
THOM_1737
Small nuclear ribonucleoprotein (SnRNP) SMF.
   
 0.888
THOM_0499
Small nuclear ribonucleoprotein Sm D3.
   
 0.886
THOM_0266
Membrane component of ER protein translocation complex.
     
 0.872
THOM_0804
U1 snRNP component.
   
 0.871
THOM_1134
Small Nuclear ribonucleoprotein G.
   
  0.870
THOM_1066
Uncharacterized protein.
   
 
 0.834
THOM_3131
Splicing factor 3b, subunit 2.
   
 
 0.830
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.