STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_3147Zn-finger. (132 aa)    
Predicted Functional Partners:
THOM_2152
Putative starch-binding protein.
    
 0.946
THOM_1036
Flavohemoprotein b5+b5R; Belongs to the cytochrome b5 family.
    
 0.899
THOM_0915
Guanylate kinase.
    
 0.820
THOM_0846
Nucleoside diphosphate kinase; Belongs to the NDK family.
    
 0.814
THOM_1845
Histone deacetylase complex, SIN3 component.
    
 0.775
THOM_0723
Putative bZIP transcription factor protein.
   
 0.766
THOM_2414
cAMP-dependent protein kinase catalytic subunit (PKA); Belongs to the protein kinase superfamily.
    
 0.747
THOM_0572
Ribosomal protein S6 kinase.
    
 0.747
THOM_0429
TATA-box binding protein (TBP), component of TFIID and TFIIIB.
    
 0.742
THOM_0677
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.740
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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