STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2804Aspartyl-tRNA synthetase. (479 aa)    
Predicted Functional Partners:
THOM_2615
Methionine---tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.998
THOM_2584
Tyrosine--tRNA ligase.
  
 0.987
THOM_2040
Prolyl-tRNA synthetase.
  
 0.939
THOM_1707
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.902
THOM_3134
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.897
THOM_0920
Isoleucyl-tRNA synthetase.
  
 0.887
THOM_3090
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.877
THOM_0414
tRNA-binding protein.
  
 0.877
THOM_0012
Asparagine synthase.
  
 0.849
THOM_3114
Lysine--tRNA ligase.
  
0.810
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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