STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2648Signal recognition particle, subunit Srp19. (131 aa)    
Predicted Functional Partners:
THOM_1720
Signal recognition particle, subunit Srp54.
   
 0.999
THOM_3014
Signal recognition particle receptor, alpha subunit.
   
 
 0.891
THOM_0620
60S ribosomal protein L36.
   
  0.771
THOM_0162
60s ribosomal protein L6.
   
  0.771
THOM_1566
60S ribosomal protein L7A.
    
 0.763
THOM_2647
Ribosomal protein RPL1/RPL2/RL4L4.
    
 0.759
THOM_0302
60S ribosomal protein L30.
   
   0.752
THOM_3137
60S ribosomal protein L22.
   
  0.751
THOM_0751
60s ribosomal protein L10.
    
 
 0.751
THOM_2822
60s ribosomal protein L18.
   
   0.749
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.