STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2678RNA helicase nonsense mRNA reducing factor (PNORF1). (339 aa)    
Predicted Functional Partners:
THOM_3154
Uncharacterized protein.
   
 0.962
THOM_3228
RasGAP SH3 binding protein rasputin.
    
 0.862
THOM_1456
Polyadenylate-binding protein (RRM superfamily).
    
 0.800
THOM_1780
Nuclear cap-binding protein subunit 2.
    
 0.792
THOM_1529
Splicing factor RNPS1, SR protein superfamily.
    
 0.765
THOM_1601
Polypeptide release factor 3.
    
 0.742
THOM_3009
Peptide chain release factor 1 (ERF1).
   
 0.727
THOM_3145
Translation initiation factor 4F, ribosome/mRNA-bridging subunit (EIF-4G).
    
 0.718
THOM_2159
Polyadenylate-binding protein (RRM superfamily).
    
 0.700
THOM_2187
Decapping enzyme complex, predicted pyrophosphatase DCP2.
    
 
 0.685
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.