STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2640Ubiquitin fusion degradation protein-2. (862 aa)    
Predicted Functional Partners:
THOM_1397
AAA+-type ATPase; Belongs to the AAA ATPase family.
  
 
 0.944
THOM_1662
Ubiquitin fusion-degradation protein.
    
 
 0.942
THOM_0442
Nuclear pore complex, rNpl4 component (Sc Npl4).
    
 
 0.930
THOM_2120
Apoptosis inhibitor IAP1, BIR domain protein.
   
  0.875
THOM_0078
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.874
THOM_2684
Ubiquitin-like protein.
    
 0.873
THOM_0228
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.842
THOM_3230
AAA+-type ATPase.
  
 
 0.803
THOM_2254
Ubiquitin-protein ligase.
    
 0.802
THOM_0646
Ubiquitin-like protein.
    
 0.796
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.