STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2139Vesicle trafficking protein Sec1; Belongs to the STXBP/unc-18/SEC1 family. (500 aa)    
Predicted Functional Partners:
THOM_3211
SNARE protein Syntaxin 1.
   
 0.964
THOM_0233
SNARE protein Syntaxin 1.
   
 0.964
THOM_1697
Exocyst complex subunit SEC6.
    
 0.769
THOM_1878
Putative Exocyst complex, component Exoc1 protein.
   
 0.654
THOM_0857
Putative Ras small GTPase.
    
 
 0.643
THOM_2096
Actin; Belongs to the actin family.
    
 0.611
THOM_1377
Actin.
    
 0.611
THOM_0546
Calponin.
    
  0.592
THOM_1620
AAA+-type ATPase.
   
 
 0.580
THOM_0915
Guanylate kinase.
   
 0.574
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.