STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2400Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
THOM_2482
Protein involved in the nuclear export of pre-ribosomes.
   
 
 0.998
THOM_2375
tRNA and rRNA cytosine-C5-methylase (Nucleolar protein NOL1/NOP2); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.994
THOM_1768
Protein required for normal rRNA processing.
   
 
 0.993
THOM_0821
Protein required for biogenesis of the ribosomal 60S subunit.
   
 
 0.988
THOM_2478
RNA-binding protein required for biogenesis of the ribosomal 60S subunit.
   
 
 0.987
THOM_0822
GTP-binding protein CRFG/NOG1 (ODN superfamily).
   
 
 0.987
THOM_2818
Putative SAM-dependent rRNA methyltransferase SPB1.
   
 
 0.983
THOM_2062
Uncharacterized protein.
   
 
 0.959
THOM_0556
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.954
THOM_1675
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.952
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.