STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_204726S proteasome regulatory complex, subunit RPN11. (329 aa)    
Predicted Functional Partners:
THOM_2733
26S proteasome regulatory complex, subunit RPN3/PSMD3.
   
 0.999
THOM_2204
Translation initiation factor 2, alpha subunit (EIF-2alpha).
   
 0.999
THOM_2343
20S proteasome, regulatory subunit alpha type PSMA2/PRE8.
   
 0.999
THOM_2910
20S proteasome, regulatory subunit alpha type PSMA1/PRE5.
   
 0.999
THOM_1952
Proteasome endopeptidase complex.
   
 0.999
THOM_1831
26S proteasome regulatory complex, ATPase RPT1; Belongs to the AAA ATPase family.
   
 0.999
THOM_2490
20S proteasome, regulatory subunit alpha type PSMA3/PRE10.
   
 0.999
THOM_2173
26S proteasome regulatory complex, subunit RPN6/PSMD11.
   
 0.999
THOM_1692
26S proteasome regulatory complex, subunit RPN9/PSMD13.
   
 0.999
THOM_1398
26S proteasome regulatory complex, ATPase RPT5; Belongs to the AAA ATPase family.
  
 0.999
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.