STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_2240RhoGEF GTPase. (1015 aa)    
Predicted Functional Partners:
THOM_3115
Ras-related small GTPase, Rho type.
    
 0.981
THOM_2143
Ras-related small GTPase, Rho type.
    
 0.942
THOM_0726
Ras-related small GTPase, Rho type.
    
 0.942
THOM_0463
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.880
THOM_0564
Uncharacterized protein.
    
 0.822
THOM_2923
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 0.765
THOM_2361
GTP-binding ADP-ribosylation factor Arf6 (DArf3).
    
 0.765
THOM_1323
Uncharacterized protein.
    
 0.765
THOM_0771
GTP-binding ADP-ribosylation factor Arf1; Belongs to the small GTPase superfamily. Arf family.
    
 0.765
THOM_0232
GTPase Rab11/YPT3, small G protein superfamily.
    
 0.765
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.