STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_1901Hly III (Hly III) Family. (208 aa)    
Predicted Functional Partners:
THOM_2690
Putative RNA-binding protein.
   
  
 0.558
THOM_0268
Major Intrinsic Protein (MIP) Family; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.544
THOM_2152
Putative starch-binding protein.
   
 
 0.530
THOM_1646
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
     
 0.521
THOM_0187
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
     
 0.512
THOM_2427
Signal peptidase complex catalytic subunit SEC11.
     
 0.510
AOX
Ubiquinol oxidase; Alternative oxidase which function may be to reoxidize reducing equivalents produced by glycolysis such as ubiquinol.
   
 0.499
THOM_0606
Serine/threonine protein kinase and endoribonuclease ERN1/IRE1.
   
 0.499
THOM_0121
Glycogen synthase kinase-3; Belongs to the protein kinase superfamily.
   
 0.499
THOM_0055
Rho-associated, coiled-coil containing protein kinase.
   
 0.499
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.