STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_0789RNA polymerase II, fourth largest subunit. (112 aa)    
Predicted Functional Partners:
THOM_1496
60S ribosomal protein L10A.
    
  0.833
THOM_1314
Uncharacterized protein.
    
  0.664
THOM_0864
Protein kinase of the PI-3 kinase family; Belongs to the PI3/PI4-kinase family.
    
  0.664
THOM_2868
Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3; Belongs to the RNR ribonuclease family.
    
 
 0.619
THOM_2159
Polyadenylate-binding protein (RRM superfamily).
   
 0.557
THOM_1456
Polyadenylate-binding protein (RRM superfamily).
   
 0.557
THOM_2311
Translation initiation factor 4F, helicase subunit; Belongs to the DEAD box helicase family.
    
 0.536
THOM_2705
Argonaute.
    
 
 0.527
THOM_2989
Uncharacterized protein.
   
 
 0.519
THOM_0499
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.517
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.