STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_0677Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (142 aa)    
Predicted Functional Partners:
THOM_3153
Ribosome biogenesis protein-Nop56p/Sik1p.
   
 0.999
THOM_2260
Fibrillarin.
   
 0.999
THOM_1073
Putative WD40/YVTN repeat-like-containing domain, WD40 repeat protein.
   
 0.996
THOM_3123
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.984
THOM_2573
40S ribosomal protein S6.
  
 0.984
THOM_1858
GTP-binding protein AARP2 involved in 40S ribosome biogenesis.
   
 
 0.983
THOM_0074
40S ribosomal protein S13.
  
 0.982
THOM_2054
40S ribosomal protein S7.
   
 0.981
THOM_0926
40S ribosomal protein S14.
  
 0.981
THOM_2953
Ribosomal protein S4.
  
 0.980
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.