STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_052340S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (59 aa)    
Predicted Functional Partners:
THOM_3123
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.999
THOM_3062
40S ribosomal protein S20.
   
 0.999
THOM_2952
60S ribosomal protein L21.
   
 
 0.999
THOM_2932
40S ribosomal protein S19.
   
 0.999
THOM_2845
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
THOM_2953
Ribosomal protein S4.
   
 0.999
THOM_3237
Ubiquitin/40S ribosomal protein S27a fusion.
   
 0.999
THOM_2336
60S ribosomal protein L14/L17/L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.999
THOM_3300
Ribosomal protein S27.
   
 0.999
THOM_2671
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.999
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.