STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_0283Putative SMAD/FHA domain, Forkhead-associated (FHA) domain protein. (590 aa)    
Predicted Functional Partners:
THOM_2014
DNA polymerase delta, regulatory subunit 55.
    
 0.743
THOM_1015
DNA polymerase.
   
 0.703
THOM_1842
Notchless-like WD40 repeat-containing protein.
   
 
 0.679
THOM_1450
Endonuclease MUS81.
    
 0.660
THOM_1737
Small nuclear ribonucleoprotein (SnRNP) SMF.
    
  0.646
THOM_1992
Putative WD40/YVTN repeat-like-containing domain, WD40 repeat protein.
   
 
 0.616
THOM_1134
Small Nuclear ribonucleoprotein G.
    
  0.615
THOM_1891
mRNA cleavage and polyadenylation factor I complex, subunit RNA15.
   
 0.603
THOM_3040
Structure-specific endonuclease ERCC1-XPF, catalytic component XPF/ERCC4.
    
 0.599
THOM_1675
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.597
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.