STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_0296Ran GTPase-activating protein. (346 aa)    
Predicted Functional Partners:
THOM_0342
GTPase Ran/TC4/GSP1 (Nuclear protein transport pathway), small G protein superfamily.
   
 0.999
THOM_0245
Ran-binding protein RANBP1, RanBD domain protein.
   
 0.995
THOM_1736
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.953
THOM_2392
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.895
THOM_1894
RCC1 domain protein.
   
 
 0.834
THOM_3156
Protease, Ulp1 family.
    
 
 0.804
THOM_2598
Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170).
   
 0.803
THOM_1859
Nuclear transport receptor CRM1/MSN5 (Importin beta superfamily).
    
 
 0.796
THOM_1507
Nuclear pore complex, Nup98 component (Sc Nup145/Nup100/Nup116).
   
 0.758
THOM_0228
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.757
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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