STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THOM_0312Ubiquitin activating enzyme UBA1. (982 aa)    
Predicted Functional Partners:
THOM_2535
Putative UBA/THIF-type.
    
 0.999
THOM_1563
Putative Ubiquitin, Ubiquitin subgroup protein.
   
 0.999
THOM_3237
Ubiquitin/40S ribosomal protein S27a fusion.
    
 0.996
THOM_0228
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.994
THOM_0078
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.967
THOM_2609
Ubiquitin/60s ribosomal protein L40 fusion.
    
 0.961
THOM_0628
Putative Zinc finger, AN1-type protein.
    
 0.950
THOM_2047
26S proteasome regulatory complex, subunit RPN11.
  
 0.914
THOM_0071
26S proteasome regulatory complex, subunit RPN10/PSMD4.
   
 0.914
THOM_2254
Ubiquitin-protein ligase.
   
 0.908
Your Current Organism:
Trachipleistophora hominis
NCBI taxonomy Id: 72359
Other names: T. hominis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.