Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
THOM_0167 | THOM_0201 | L7JZF6 | L7K0I9 | Glycine/serine hydroxymethyltransferase. | Uncharacterized protein. | 0.865 |
THOM_0167 | THOM_0764 | L7JZF6 | L7JXW2 | Glycine/serine hydroxymethyltransferase. | Dehydrogenase with different specificities. | 0.575 |
THOM_0167 | THOM_1224 | L7JZF6 | L7JWL9 | Glycine/serine hydroxymethyltransferase. | Glucose 1-dehydrogenase, 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.575 |
THOM_0167 | THOM_1225 | L7JZF6 | L7JWZ2 | Glycine/serine hydroxymethyltransferase. | Putative short-chain dehydrogenase/reductase SDR. | 0.603 |
THOM_0167 | THOM_1277 | L7JZF6 | L7JWG0 | Glycine/serine hydroxymethyltransferase. | Dihydrofolate reductase. | 0.880 |
THOM_0167 | THOM_1340 | L7JZF6 | L7JW42 | Glycine/serine hydroxymethyltransferase. | Bifunctional Thymidylate synthase. | 0.880 |
THOM_0201 | THOM_0167 | L7K0I9 | L7JZF6 | Uncharacterized protein. | Glycine/serine hydroxymethyltransferase. | 0.865 |
THOM_0201 | THOM_0764 | L7K0I9 | L7JXW2 | Uncharacterized protein. | Dehydrogenase with different specificities. | 0.830 |
THOM_0201 | THOM_0980 | L7K0I9 | L7JYB7 | Uncharacterized protein. | Glycine/serine hydroxymethyltransferase. | 0.865 |
THOM_0201 | THOM_1224 | L7K0I9 | L7JWL9 | Uncharacterized protein. | Glucose 1-dehydrogenase, 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.839 |
THOM_0201 | THOM_1225 | L7K0I9 | L7JWZ2 | Uncharacterized protein. | Putative short-chain dehydrogenase/reductase SDR. | 0.830 |
THOM_0201 | THOM_1277 | L7K0I9 | L7JWG0 | Uncharacterized protein. | Dihydrofolate reductase. | 0.990 |
THOM_0201 | THOM_1340 | L7K0I9 | L7JW42 | Uncharacterized protein. | Bifunctional Thymidylate synthase. | 0.990 |
THOM_0201 | THOM_1857 | L7K0I9 | L7JV02 | Uncharacterized protein. | Putative ATPase. | 0.785 |
THOM_0201 | THOM_2625 | L7K0I9 | L7JT05 | Uncharacterized protein. | Glycine/serine hydroxymethyltransferase. | 0.865 |
THOM_0201 | THOM_2964 | L7K0I9 | L7JS56 | Uncharacterized protein. | Putative ATPase. | 0.785 |
THOM_0764 | THOM_0167 | L7JXW2 | L7JZF6 | Dehydrogenase with different specificities. | Glycine/serine hydroxymethyltransferase. | 0.575 |
THOM_0764 | THOM_0201 | L7JXW2 | L7K0I9 | Dehydrogenase with different specificities. | Uncharacterized protein. | 0.830 |
THOM_0764 | THOM_0980 | L7JXW2 | L7JYB7 | Dehydrogenase with different specificities. | Glycine/serine hydroxymethyltransferase. | 0.575 |
THOM_0764 | THOM_1224 | L7JXW2 | L7JWL9 | Dehydrogenase with different specificities. | Glucose 1-dehydrogenase, 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.939 |
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