Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM13496 | DsecGM24051 | B4IEY9 | B4HGV1 | GM13496. | GM24051. | 0.619 |
DsecGM13496 | DsecGM24399 | B4IEY9 | B4HJN5 | GM13496. | GM24399. | 0.611 |
DsecGM13497 | DsecGM24051 | B4IEZ0 | B4HGV1 | GM13497. | GM24051. | 0.618 |
DsecGM13497 | DsecGM24399 | B4IEZ0 | B4HJN5 | GM13497. | GM24399. | 0.610 |
DsecGM14402 | DsecGM23272 | B4HVR9 | B4IFL2 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | GM23272. | 0.603 |
DsecGM14402 | DsecGM24051 | B4HVR9 | B4HGV1 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | GM24051. | 0.580 |
DsecGM14463 | DsecGM15393 | B4HW36 | B4IBN8 | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.691 |
DsecGM14463 | DsecGM24051 | B4HW36 | B4HGV1 | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | GM24051. | 0.435 |
DsecGM15393 | DsecGM14463 | B4IBN8 | B4HW36 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.691 |
DsecGM15393 | DsecGM24051 | B4IBN8 | B4HGV1 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GM24051. | 0.425 |
DsecGM18227 | DsecGM24051 | B4I2K6 | B4HGV1 | GM18227. | GM24051. | 0.619 |
DsecGM18227 | DsecGM24399 | B4I2K6 | B4HJN5 | GM18227. | GM24399. | 0.611 |
DsecGM23272 | DsecGM14402 | B4IFL2 | B4HVR9 | GM23272. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.603 |
DsecGM23272 | DsecGM24051 | B4IFL2 | B4HGV1 | GM23272. | GM24051. | 0.419 |
DsecGM24051 | DsecGM13496 | B4HGV1 | B4IEY9 | GM24051. | GM13496. | 0.619 |
DsecGM24051 | DsecGM13497 | B4HGV1 | B4IEZ0 | GM24051. | GM13497. | 0.618 |
DsecGM24051 | DsecGM14402 | B4HGV1 | B4HVR9 | GM24051. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.580 |
DsecGM24051 | DsecGM14463 | B4HGV1 | B4HW36 | GM24051. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.435 |
DsecGM24051 | DsecGM15393 | B4HGV1 | B4IBN8 | GM24051. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.425 |
DsecGM24051 | DsecGM18227 | B4HGV1 | B4I2K6 | GM24051. | GM18227. | 0.619 |
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