Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM10081 | DsecGM12765 | B4IMK6 | B4HZ58 | GM10081. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.655 |
DsecGM10081 | DsecGM16455 | B4IMK6 | B4HY62 | GM10081. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.981 |
DsecGM10081 | DsecGM21122 | B4IMK6 | B4HSS5 | GM10081. | Protein-serine/threonine kinase. | 0.800 |
DsecGM10081 | DsecGM23935 | B4IMK6 | B4HIB0 | GM10081. | GM23935. | 0.978 |
DsecGM10081 | DsecGM24403 | B4IMK6 | B4HJM9 | GM10081. | GM24403. | 0.845 |
DsecGM10081 | DsecGM25722 | B4IMK6 | B4HLB4 | GM10081. | Dihydrolipoyl dehydrogenase. | 0.999 |
DsecGM11355 | DsecGM13655 | B4IDH9 | B4HY19 | Lysine--tRNA ligase. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.748 |
DsecGM11355 | DsecGM18297 | B4IDH9 | B4I2C2 | Lysine--tRNA ligase. | Eukaryotic translation initiation factor 5A. | 0.835 |
DsecGM11355 | DsecGM23523 | B4IDH9 | B4HG12 | Lysine--tRNA ligase. | GM23523. | 0.999 |
DsecGM11355 | DsecGM24403 | B4IDH9 | B4HJM9 | Lysine--tRNA ligase. | GM24403. | 0.704 |
DsecGM12765 | DsecGM10081 | B4HZ58 | B4IMK6 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | GM10081. | 0.655 |
DsecGM12765 | DsecGM16455 | B4HZ58 | B4HY62 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.999 |
DsecGM12765 | DsecGM21122 | B4HZ58 | B4HSS5 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Protein-serine/threonine kinase. | 0.889 |
DsecGM12765 | DsecGM23523 | B4HZ58 | B4HG12 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | GM23523. | 0.571 |
DsecGM12765 | DsecGM23935 | B4HZ58 | B4HIB0 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | GM23935. | 0.986 |
DsecGM12765 | DsecGM24403 | B4HZ58 | B4HJM9 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | GM24403. | 0.985 |
DsecGM12765 | DsecGM25722 | B4HZ58 | B4HLB4 | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Dihydrolipoyl dehydrogenase. | 0.999 |
DsecGM13655 | DsecGM11355 | B4HY19 | B4IDH9 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Lysine--tRNA ligase. | 0.748 |
DsecGM13655 | DsecGM21122 | B4HY19 | B4HSS5 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Protein-serine/threonine kinase. | 0.636 |
DsecGM13655 | DsecGM23523 | B4HY19 | B4HG12 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | GM23523. | 0.854 |
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