Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM11060 | DsecGM13516 | B4HX55 | B4IF25 | GM11060. | GM13516. | 0.780 |
DsecGM11060 | DsecGM15644 | B4HX55 | B4I834 | GM11060. | GM15644. | 0.529 |
DsecGM11060 | DsecGM16210 | B4HX55 | B4HXX0 | GM11060. | GM16210. | 0.529 |
DsecGM11060 | DsecGM18968 | B4HX55 | B4I9F7 | GM11060. | GM18968. | 0.503 |
DsecGM11060 | DsecGM23127 | B4HX55 | B4II95 | GM11060. | GM23127. | 0.998 |
DsecGM11060 | DsecGM23691 | B4HX55 | B4HM48 | GM11060. | GM23691. | 0.998 |
DsecGM11060 | DsecGM23693 | B4HX55 | B4HM46 | GM11060. | GM23693; Belongs to the MAGUK family. | 0.998 |
DsecGM11060 | DsecGM26438 | B4HX55 | B4HE98 | GM11060. | GM26438. | 0.650 |
DsecGM11060 | Nmdar1 | B4HX55 | B4I414 | GM11060. | Glutamate [NMDA] receptor subunit 1; NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation (By similarity). | 0.762 |
DsecGM11060 | Urm1 | B4HX55 | B4HVA2 | GM11060. | Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as Jafrac1, Ciao1, Eip71CD and GILT1. The thiocarboxylated form serves as substrate [...] | 0.756 |
DsecGM13516 | DsecGM11060 | B4IF25 | B4HX55 | GM13516. | GM11060. | 0.780 |
DsecGM13516 | DsecGM15644 | B4IF25 | B4I834 | GM13516. | GM15644. | 0.556 |
DsecGM13516 | DsecGM16210 | B4IF25 | B4HXX0 | GM13516. | GM16210. | 0.649 |
DsecGM13516 | DsecGM23691 | B4IF25 | B4HM48 | GM13516. | GM23691. | 0.999 |
DsecGM13516 | DsecGM23693 | B4IF25 | B4HM46 | GM13516. | GM23693; Belongs to the MAGUK family. | 0.999 |
DsecGM13516 | Urm1 | B4IF25 | B4HVA2 | GM13516. | Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as Jafrac1, Ciao1, Eip71CD and GILT1. The thiocarboxylated form serves as substrate [...] | 0.871 |
DsecGM15644 | DsecGM11060 | B4I834 | B4HX55 | GM15644. | GM11060. | 0.529 |
DsecGM15644 | DsecGM13516 | B4I834 | B4IF25 | GM15644. | GM13516. | 0.556 |
DsecGM15644 | DsecGM23691 | B4I834 | B4HM48 | GM15644. | GM23691. | 0.977 |
DsecGM15644 | DsecGM23693 | B4I834 | B4HM46 | GM15644. | GM23693; Belongs to the MAGUK family. | 0.977 |
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