Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM10189 | DsecGM10318 | B4ICK7 | B4ICL3 | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | GM10318. | 0.989 |
DsecGM10189 | DsecGM14947 | B4ICK7 | B4IFR3 | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | GM14947. | 0.977 |
DsecGM10189 | DsecGM16065 | B4ICK7 | B4I8W9 | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.958 |
DsecGM10189 | DsecGM20655 | B4ICK7 | B4HSB1 | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.973 |
DsecGM10189 | DsecGM21390 | B4ICK7 | B4HPI6 | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | GM21390. | 0.904 |
DsecGM10318 | DsecGM10189 | B4ICL3 | B4ICK7 | GM10318. | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | 0.989 |
DsecGM10318 | DsecGM14947 | B4ICL3 | B4IFR3 | GM10318. | GM14947. | 0.979 |
DsecGM10318 | DsecGM16065 | B4ICL3 | B4I8W9 | GM10318. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.958 |
DsecGM10318 | DsecGM20655 | B4ICL3 | B4HSB1 | GM10318. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.971 |
DsecGM10318 | DsecGM21390 | B4ICL3 | B4HPI6 | GM10318. | GM21390. | 0.904 |
DsecGM14947 | DsecGM10189 | B4IFR3 | B4ICK7 | GM14947. | Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. | 0.977 |
DsecGM14947 | DsecGM10318 | B4IFR3 | B4ICL3 | GM14947. | GM10318. | 0.979 |
DsecGM14947 | DsecGM15646 | B4IFR3 | B4I831 | GM14947. | GM15646. | 0.436 |
DsecGM14947 | DsecGM16065 | B4IFR3 | B4I8W9 | GM14947. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.999 |
DsecGM14947 | DsecGM19077 | B4IFR3 | B4I938 | GM14947. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.953 |
DsecGM14947 | DsecGM20655 | B4IFR3 | B4HSB1 | GM14947. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.997 |
DsecGM14947 | DsecGM21390 | B4IFR3 | B4HPI6 | GM14947. | GM21390. | 0.953 |
DsecGM15646 | DsecGM14947 | B4I831 | B4IFR3 | GM15646. | GM14947. | 0.436 |
DsecGM15646 | DsecGM16065 | B4I831 | B4I8W9 | GM15646. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.409 |
DsecGM15646 | DsecGM19077 | B4I831 | B4I938 | GM15646. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.439 |
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