Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM12179 | DsecGM17934 | B4HZM4 | B4I1W3 | Triosephosphate isomerase. | GM17934. | 0.716 |
DsecGM12179 | DsecGM19929 | B4HZM4 | B4HNB6 | Triosephosphate isomerase. | GM19929. | 0.586 |
DsecGM12179 | DsecGM20907 | B4HZM4 | B4HQD8 | Triosephosphate isomerase. | GM20907. | 0.446 |
DsecGM12179 | DsecGM24400 | B4HZM4 | B4HJN3 | Triosephosphate isomerase. | Tyrosine--tRNA ligase. | 0.728 |
DsecGM14699 | DsecGM17934 | B4HUE3 | B4I1W3 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | GM17934. | 0.893 |
DsecGM14699 | DsecGM20907 | B4HUE3 | B4HQD8 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | GM20907. | 0.408 |
DsecGM14699 | DsecGM24400 | B4HUE3 | B4HJN3 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | Tyrosine--tRNA ligase. | 0.791 |
DsecGM15451 | DsecGM20907 | B4IBZ2 | B4HQD8 | GM15451. | GM20907. | 0.533 |
DsecGM15451 | DsecGM24400 | B4IBZ2 | B4HJN3 | GM15451. | Tyrosine--tRNA ligase. | 0.784 |
DsecGM17934 | DsecGM12179 | B4I1W3 | B4HZM4 | GM17934. | Triosephosphate isomerase. | 0.716 |
DsecGM17934 | DsecGM14699 | B4I1W3 | B4HUE3 | GM17934. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.893 |
DsecGM17934 | DsecGM20907 | B4I1W3 | B4HQD8 | GM17934. | GM20907. | 0.450 |
DsecGM17934 | DsecGM24400 | B4I1W3 | B4HJN3 | GM17934. | Tyrosine--tRNA ligase. | 0.700 |
DsecGM19929 | DsecGM12179 | B4HNB6 | B4HZM4 | GM19929. | Triosephosphate isomerase. | 0.586 |
DsecGM19929 | DsecGM20907 | B4HNB6 | B4HQD8 | GM19929. | GM20907. | 0.425 |
DsecGM20907 | DsecGM12179 | B4HQD8 | B4HZM4 | GM20907. | Triosephosphate isomerase. | 0.446 |
DsecGM20907 | DsecGM14699 | B4HQD8 | B4HUE3 | GM20907. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.408 |
DsecGM20907 | DsecGM15451 | B4HQD8 | B4IBZ2 | GM20907. | GM15451. | 0.533 |
DsecGM20907 | DsecGM17934 | B4HQD8 | B4I1W3 | GM20907. | GM17934. | 0.450 |
DsecGM20907 | DsecGM19929 | B4HQD8 | B4HNB6 | GM20907. | GM19929. | 0.425 |
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