Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM13374 | DsecGM13756 | B4IER7 | B4HV71 | GM13374. | GM13756. | 0.760 |
DsecGM13374 | DsecGM16301 | B4IER7 | B4IGZ2 | GM13374. | GM16301; Belongs to the peptidase S1 family. | 0.485 |
DsecGM13756 | DsecGM13374 | B4HV71 | B4IER7 | GM13756. | GM13374. | 0.760 |
DsecGM13756 | DsecGM14297 | B4HV71 | B4HXR4 | GM13756. | Metalloendopeptidase. | 0.621 |
DsecGM13756 | DsecGM15048 | B4HV71 | B4HXB1 | GM13756. | GM15048. | 0.427 |
DsecGM13756 | DsecGM16301 | B4HV71 | B4IGZ2 | GM13756. | GM16301; Belongs to the peptidase S1 family. | 0.611 |
DsecGM13756 | DsecGM22175 | B4HV71 | B4IAI1 | GM13756. | GM22175; Belongs to the peptidase S1 family. | 0.426 |
DsecGM13756 | DsecGM22813 | B4HV71 | B4I6S8 | GM13756. | GM22813; Belongs to the peptidase S1 family. | 0.610 |
DsecGM13756 | DsecGM26244 | B4HV71 | B4HJX8 | GM13756. | U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. | 0.758 |
DsecGM14297 | DsecGM13756 | B4HXR4 | B4HV71 | Metalloendopeptidase. | GM13756. | 0.621 |
DsecGM14297 | DsecGM16301 | B4HXR4 | B4IGZ2 | Metalloendopeptidase. | GM16301; Belongs to the peptidase S1 family. | 0.646 |
DsecGM14297 | DsecGM22175 | B4HXR4 | B4IAI1 | Metalloendopeptidase. | GM22175; Belongs to the peptidase S1 family. | 0.580 |
DsecGM15048 | DsecGM13756 | B4HXB1 | B4HV71 | GM15048. | GM13756. | 0.427 |
DsecGM15048 | DsecGM16301 | B4HXB1 | B4IGZ2 | GM15048. | GM16301; Belongs to the peptidase S1 family. | 0.766 |
DsecGM16301 | DsecGM13374 | B4IGZ2 | B4IER7 | GM16301; Belongs to the peptidase S1 family. | GM13374. | 0.485 |
DsecGM16301 | DsecGM13756 | B4IGZ2 | B4HV71 | GM16301; Belongs to the peptidase S1 family. | GM13756. | 0.611 |
DsecGM16301 | DsecGM14297 | B4IGZ2 | B4HXR4 | GM16301; Belongs to the peptidase S1 family. | Metalloendopeptidase. | 0.646 |
DsecGM16301 | DsecGM15048 | B4IGZ2 | B4HXB1 | GM16301; Belongs to the peptidase S1 family. | GM15048. | 0.766 |
DsecGM16301 | DsecGM22813 | B4IGZ2 | B4I6S8 | GM16301; Belongs to the peptidase S1 family. | GM22813; Belongs to the peptidase S1 family. | 0.444 |
DsecGM22175 | DsecGM13756 | B4IAI1 | B4HV71 | GM22175; Belongs to the peptidase S1 family. | GM13756. | 0.426 |
page 1 of 2