Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM10998 | DsecGM15082 | B4I3E2 | B4HXA5 | DNA polymerase. | GM15082. | 0.488 |
DsecGM10998 | DsecGM15104 | B4I3E2 | B4HXA2 | DNA polymerase. | GM15104. | 0.497 |
DsecGM10998 | DsecGM15275 | B4I3E2 | B4HXA4 | DNA polymerase. | GM15275. | 0.806 |
DsecGM10998 | WRNexo | B4I3E2 | B4I298 | DNA polymerase. | Werner Syndrome-like exonuclease; Essential for the formation of DNA replication focal centers. Has an important role in maintaining genome stability. Has exonuclease activity on both single-stranded and duplex templates bearing overhangs, but not blunt ended duplex DNA, and cleaves in a 3'-5' direction (By similarity); Belongs to the WRNexo family. | 0.474 |
DsecGM12211 | DsecGM14869 | B4HWB5 | B4HXG1 | GM12211. | GM14869. | 0.626 |
DsecGM12211 | DsecGM15082 | B4HWB5 | B4HXA5 | GM12211. | GM15082. | 0.773 |
DsecGM12211 | DsecGM15104 | B4HWB5 | B4HXA2 | GM12211. | GM15104. | 0.891 |
DsecGM12211 | DsecGM15451 | B4HWB5 | B4IBZ2 | GM12211. | GM15451. | 0.900 |
DsecGM12211 | DsecGM16628 | B4HWB5 | B4ID50 | GM12211. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.674 |
DsecGM14869 | DsecGM12211 | B4HXG1 | B4HWB5 | GM14869. | GM12211. | 0.626 |
DsecGM14869 | DsecGM15082 | B4HXG1 | B4HXA5 | GM14869. | GM15082. | 0.426 |
DsecGM14869 | DsecGM15104 | B4HXG1 | B4HXA2 | GM14869. | GM15104. | 0.611 |
DsecGM14869 | DsecGM15451 | B4HXG1 | B4IBZ2 | GM14869. | GM15451. | 0.508 |
DsecGM14869 | DsecGM16628 | B4HXG1 | B4ID50 | GM14869. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.426 |
DsecGM14869 | GM15071 | B4HXG1 | B4HXA6 | GM14869. | Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.611 |
DsecGM15060 | DsecGM15082 | B4HXA8 | B4HXA5 | GM15060. | GM15082. | 0.618 |
DsecGM15060 | DsecGM15451 | B4HXA8 | B4IBZ2 | GM15060. | GM15451. | 0.585 |
DsecGM15060 | GM15071 | B4HXA8 | B4HXA6 | GM15060. | Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.759 |
DsecGM15082 | DsecGM10998 | B4HXA5 | B4I3E2 | GM15082. | DNA polymerase. | 0.488 |
DsecGM15082 | DsecGM12211 | B4HXA5 | B4HWB5 | GM15082. | GM12211. | 0.773 |
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