Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM15423 | DsecGM16262 | B4IBU2 | B4IPW8 | GM15423; Belongs to the peptidase C14A family. | GM16262. | 0.815 |
DsecGM15423 | DsecGM17196 | B4IBU2 | B4I533 | GM15423; Belongs to the peptidase C14A family. | GM17196; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.929 |
DsecGM15423 | DsecGM17197 | B4IBU2 | B4I534 | GM15423; Belongs to the peptidase C14A family. | GM17197; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.929 |
DsecGM15423 | DsecGM20882 | B4IBU2 | B4HPW0 | GM15423; Belongs to the peptidase C14A family. | GM20882. | 0.921 |
DsecGM15423 | DsecGM21747 | B4IBU2 | B4HMG4 | GM15423; Belongs to the peptidase C14A family. | GM21747. | 0.936 |
DsecGM15423 | DsecGM23127 | B4IBU2 | B4II95 | GM15423; Belongs to the peptidase C14A family. | GM23127. | 0.851 |
DsecGM15423 | DsecGM24199 | B4IBU2 | B4HE20 | GM15423; Belongs to the peptidase C14A family. | GM24199. | 0.858 |
DsecGM15423 | DsecGM24284 | B4IBU2 | B4HLD8 | GM15423; Belongs to the peptidase C14A family. | Non-specific serine/threonine protein kinase. | 0.919 |
DsecGM15423 | DsecGM24450 | B4IBU2 | B4HJ06 | GM15423; Belongs to the peptidase C14A family. | GM24450. | 0.952 |
DsecGM15423 | DsecGM26173 | B4IBU2 | B4HIU5 | GM15423; Belongs to the peptidase C14A family. | GM26173. | 0.866 |
DsecGM16262 | DsecGM15423 | B4IPW8 | B4IBU2 | GM16262. | GM15423; Belongs to the peptidase C14A family. | 0.815 |
DsecGM16262 | DsecGM17196 | B4IPW8 | B4I533 | GM16262. | GM17196; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.471 |
DsecGM16262 | DsecGM17197 | B4IPW8 | B4I534 | GM16262. | GM17197; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.471 |
DsecGM16262 | DsecGM21747 | B4IPW8 | B4HMG4 | GM16262. | GM21747. | 0.590 |
DsecGM16262 | DsecGM23127 | B4IPW8 | B4II95 | GM16262. | GM23127. | 0.994 |
DsecGM16262 | DsecGM24284 | B4IPW8 | B4HLD8 | GM16262. | Non-specific serine/threonine protein kinase. | 0.505 |
DsecGM16262 | DsecGM26173 | B4IPW8 | B4HIU5 | GM16262. | GM26173. | 0.651 |
DsecGM17196 | DsecGM15423 | B4I533 | B4IBU2 | GM17196; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | GM15423; Belongs to the peptidase C14A family. | 0.929 |
DsecGM17196 | DsecGM16262 | B4I533 | B4IPW8 | GM17196; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | GM16262. | 0.471 |
DsecGM17196 | DsecGM17197 | B4I533 | B4I534 | GM17196; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | GM17197; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.760 |
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