Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM10810 | DsecGM11760 | B4I408 | B4IHD6 | GM10810. | GM11760. | 0.491 |
DsecGM10810 | DsecGM20880 | B4I408 | B4HPV7 | GM10810. | GM20880. | 0.988 |
DsecGM11760 | DsecGM10810 | B4IHD6 | B4I408 | GM11760. | GM10810. | 0.491 |
DsecGM11760 | DsecGM14504 | B4IHD6 | B4HTF0 | GM11760. | GM14504. | 0.504 |
DsecGM11760 | DsecGM15423 | B4IHD6 | B4IBU2 | GM11760. | GM15423; Belongs to the peptidase C14A family. | 0.654 |
DsecGM11760 | DsecGM16111 | B4IHD6 | B4HXS1 | GM11760. | GM16111. | 0.535 |
DsecGM11760 | DsecGM17265 | B4IHD6 | B4I5E7 | GM11760. | GM17265. | 0.679 |
DsecGM11760 | DsecGM17359 | B4IHD6 | B4HYU2 | GM11760. | GM17359. | 0.763 |
DsecGM11760 | DsecGM18287 | B4IHD6 | B4HWM8 | GM11760. | GM18287. | 0.757 |
DsecGM11760 | DsecGM20154 | B4IHD6 | B4HS12 | GM11760. | GM20154. | 0.698 |
DsecGM11760 | DsecGM20155 | B4IHD6 | B4HS10 | GM11760. | GM20155. | 0.636 |
DsecGM11760 | DsecGM20880 | B4IHD6 | B4HPV7 | GM11760. | GM20880. | 0.527 |
DsecGM14504 | DsecGM11760 | B4HTF0 | B4IHD6 | GM14504. | GM11760. | 0.504 |
DsecGM14504 | DsecGM15423 | B4HTF0 | B4IBU2 | GM14504. | GM15423; Belongs to the peptidase C14A family. | 0.763 |
DsecGM14504 | DsecGM18287 | B4HTF0 | B4HWM8 | GM14504. | GM18287. | 0.646 |
DsecGM15423 | DsecGM11760 | B4IBU2 | B4IHD6 | GM15423; Belongs to the peptidase C14A family. | GM11760. | 0.654 |
DsecGM15423 | DsecGM14504 | B4IBU2 | B4HTF0 | GM15423; Belongs to the peptidase C14A family. | GM14504. | 0.763 |
DsecGM15423 | DsecGM17265 | B4IBU2 | B4I5E7 | GM15423; Belongs to the peptidase C14A family. | GM17265. | 0.763 |
DsecGM15423 | DsecGM17359 | B4IBU2 | B4HYU2 | GM15423; Belongs to the peptidase C14A family. | GM17359. | 0.651 |
DsecGM15423 | DsecGM18287 | B4IBU2 | B4HWM8 | GM15423; Belongs to the peptidase C14A family. | GM18287. | 0.680 |
page 1 of 2