Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM10055 | DsecGM10152 | B4IKP4 | B4IC15 | GM10055. | GM10152; Belongs to the aldehyde dehydrogenase family. | 0.925 |
DsecGM10055 | DsecGM10827 | B4IKP4 | B4I448 | GM10055. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.501 |
DsecGM10055 | DsecGM13035 | B4IKP4 | B4IK80 | GM10055. | GM13035; Belongs to the HAD-like hydrolase superfamily. | 0.481 |
DsecGM10055 | DsecGM13036 | B4IKP4 | B4IK79 | GM10055. | GM13036; Belongs to the HAD-like hydrolase superfamily. | 0.810 |
DsecGM10055 | DsecGM13116 | B4IKP4 | B4IK78 | GM10055. | GM13116; Belongs to the HAD-like hydrolase superfamily. | 0.854 |
DsecGM10055 | DsecGM14402 | B4IKP4 | B4HVR9 | GM10055. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.509 |
DsecGM10055 | DsecGM17439 | B4IKP4 | B4HYX0 | GM10055. | GM17439; Belongs to the aldehyde dehydrogenase family. | 0.934 |
DsecGM10055 | DsecGM18285 | B4IKP4 | B4I2A7 | GM10055. | GM18285. | 0.462 |
DsecGM10055 | DsecGM18860 | B4IKP4 | B4I9Y8 | GM10055. | GM18860; Belongs to the HAD-like hydrolase superfamily. | 0.853 |
DsecGM10055 | DsecGM21690 | B4IKP4 | B4HSW8 | GM10055. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.646 |
DsecGM10152 | DsecGM10055 | B4IC15 | B4IKP4 | GM10152; Belongs to the aldehyde dehydrogenase family. | GM10055. | 0.925 |
DsecGM10152 | DsecGM17439 | B4IC15 | B4HYX0 | GM10152; Belongs to the aldehyde dehydrogenase family. | GM17439; Belongs to the aldehyde dehydrogenase family. | 0.989 |
DsecGM10152 | DsecGM18285 | B4IC15 | B4I2A7 | GM10152; Belongs to the aldehyde dehydrogenase family. | GM18285. | 0.469 |
DsecGM10827 | DsecGM10055 | B4I448 | B4IKP4 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | GM10055. | 0.501 |
DsecGM10827 | DsecGM14402 | B4I448 | B4HVR9 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.997 |
DsecGM10827 | DsecGM21690 | B4I448 | B4HSW8 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.706 |
DsecGM13035 | DsecGM10055 | B4IK80 | B4IKP4 | GM13035; Belongs to the HAD-like hydrolase superfamily. | GM10055. | 0.481 |
DsecGM13036 | DsecGM10055 | B4IK79 | B4IKP4 | GM13036; Belongs to the HAD-like hydrolase superfamily. | GM10055. | 0.810 |
DsecGM13036 | DsecGM13116 | B4IK79 | B4IK78 | GM13036; Belongs to the HAD-like hydrolase superfamily. | GM13116; Belongs to the HAD-like hydrolase superfamily. | 0.904 |
DsecGM13036 | DsecGM18860 | B4IK79 | B4I9Y8 | GM13036; Belongs to the HAD-like hydrolase superfamily. | GM18860; Belongs to the HAD-like hydrolase superfamily. | 0.913 |
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