Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DsecGM11680 | DsecGM12926 | B4IMG9 | B4I001 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM12926. | 0.993 |
DsecGM11680 | DsecGM13736 | B4IMG9 | B4HXZ8 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM13736. | 0.994 |
DsecGM11680 | DsecGM15388 | B4IMG9 | B4IBM6 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM15388. | 0.992 |
DsecGM11680 | DsecGM20605 | B4IMG9 | B4HSR8 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.992 |
DsecGM11680 | DsecGM21787 | B4IMG9 | B4IK02 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.996 |
DsecGM11680 | DsecGM23396 | B4IMG9 | B4IFL5 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM23396. | 0.993 |
DsecGM11680 | DsecGM26099 | B4IMG9 | B4HI26 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM26099. | 0.993 |
DsecGM11680 | DsecGM26397 | B4IMG9 | B4HM85 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM26397; Belongs to the DEAD box helicase family. | 0.993 |
DsecGM11680 | DsecGM26446 | B4IMG9 | B4HEQ2 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | GM26446. | 0.995 |
DsecGM11680 | GM21825 | B4IMG9 | B4HN85 | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.993 |
DsecGM12926 | DsecGM11680 | B4I001 | B4IMG9 | GM12926. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.993 |
DsecGM12926 | DsecGM13736 | B4I001 | B4HXZ8 | GM12926. | GM13736. | 0.964 |
DsecGM12926 | DsecGM15388 | B4I001 | B4IBM6 | GM12926. | GM15388. | 0.999 |
DsecGM12926 | DsecGM20605 | B4I001 | B4HSR8 | GM12926. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.993 |
DsecGM12926 | DsecGM21787 | B4I001 | B4IK02 | GM12926. | Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. | 0.943 |
DsecGM12926 | DsecGM23396 | B4I001 | B4IFL5 | GM12926. | GM23396. | 0.994 |
DsecGM12926 | DsecGM26099 | B4I001 | B4HI26 | GM12926. | GM26099. | 0.992 |
DsecGM12926 | DsecGM26397 | B4I001 | B4HM85 | GM12926. | GM26397; Belongs to the DEAD box helicase family. | 0.991 |
DsecGM12926 | DsecGM26446 | B4I001 | B4HEQ2 | GM12926. | GM26446. | 0.996 |
DsecGM12926 | GM21825 | B4I001 | B4HN85 | GM12926. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.997 |
page 1 of 6