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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvirGJ12131Uncharacterized protein, isoform B. (536 aa)    
Predicted Functional Partners:
DvirGJ22283
Uncharacterized protein.
      
 0.587
DvirGJ26100
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.582
DvirGJ10046
Uncharacterized protein, isoform B.
    
 
 0.548
DvirGJ24697
EMC1_C domain-containing protein.
   
  
 0.548
DvirGJ12988
Uncharacterized protein, isoform A.
      
 0.544
DvirGJ24500
Neutral ceramidase.
      
 0.540
DvirGJ16789
GOLD domain-containing protein.
      
 0.540
DvirGJ10570
Uncharacterized protein.
      
 0.463
DvirGJ21814
Aminotran_1_2 domain-containing protein.
      
 0.448
DvirGJ23141
Uncharacterized protein.
      
 0.444
Your Current Organism:
Drosophila virilis
NCBI taxonomy Id: 7244
Other names: D. virilis
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