STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DvirGJ16898Uncharacterized protein. (5505 aa)    
Predicted Functional Partners:
DvirGJ16220
Ubiquitin-like domain-containing protein.
    
 0.877
DvirGJ21841
Uncharacterized protein, isoform A.
   
 0.844
DvirGJ16000
Uncharacterized protein, isoform A.
   
 0.832
DvirGJ16068
Uncharacterized protein.
   
 0.832
DvirGJ20435
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.723
DvirGJ18821
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.708
DvirGJ23969
Ubiquitin-like domain-containing protein.
   
 0.682
DvirGJ20399
UBR-type domain-containing protein.
   
 
 0.673
DvirGJ18771
BHLH domain-containing protein.
    
 
 0.657
DvirGJ22697
RRM domain-containing protein.
    
 
 0.649
Your Current Organism:
Drosophila virilis
NCBI taxonomy Id: 7244
Other names: D. virilis
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