STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbp80Dead box protein 80. (465 aa)    
Predicted Functional Partners:
DvirGJ20758
Uncharacterized protein, isoform A.
    
 0.875
DvirGJ21828
Uncharacterized protein.
    
 0.828
GJ14807
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.797
DvirGJ10591
CP-type G domain-containing protein.
  
 0.722
DvirGJ17567
Nop domain-containing protein.
  
 
 0.705
DvirGJ18233
Uncharacterized protein.
   
 0.695
DvirGJ12853
Uncharacterized protein, isoform A.
   
 0.694
GJ22246
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.691
DvirGJ10510
Uncharacterized protein.
   
 0.685
RpL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.674
Your Current Organism:
Drosophila virilis
NCBI taxonomy Id: 7244
Other names: D. virilis
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