DvirGJ12753 protein (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DvirGJ12753

Uncharacterized protein. (1103 aa)

Predicted Functional Partners:

DvirGJ14160

0.895

cni

0.864

DvirGJ19371

0.861

DvirGJ10862

0.843

DvirGJ16275

0.761

DvirGJ14897

0.759

DvirGJ23976

0.588

DvirGJ20463

0.585

DvirGJ12484

0.554

DvirGJ15260

0.554

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10862	DvirGJ12753	B4LT23	B4LHH3	Uncharacterized protein.	Uncharacterized protein.	0.843
DvirGJ10862	DvirGJ19371	B4LT23	A0A0Q9WJX5	Uncharacterized protein.	Uncharacterized protein.	0.535
DvirGJ12484	DvirGJ12753	B4LCU6	B4LHH3	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	Uncharacterized protein.	0.554
DvirGJ12484	DvirGJ16275	B4LCU6	A0A0Q9WLI2	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	Uncharacterized protein, isoform C.	0.546
DvirGJ12753	DvirGJ10862	B4LHH3	B4LT23	Uncharacterized protein.	Uncharacterized protein.	0.843
DvirGJ12753	DvirGJ12484	B4LHH3	B4LCU6	Uncharacterized protein.	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.	0.554
DvirGJ12753	DvirGJ14160	B4LHH3	B4MC57	Uncharacterized protein.	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	0.895
DvirGJ12753	DvirGJ14897	B4LHH3	B4LQE8	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.759
DvirGJ12753	DvirGJ15260	B4LHH3	B4LQV7	Uncharacterized protein.	Uncharacterized protein.	0.554
DvirGJ12753	DvirGJ16275	B4LHH3	A0A0Q9WLI2	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.761
DvirGJ12753	DvirGJ19371	B4LHH3	A0A0Q9WJX5	Uncharacterized protein.	Uncharacterized protein.	0.861
DvirGJ12753	DvirGJ20463	B4LHH3	D0Z795	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.585
DvirGJ12753	DvirGJ23976	B4LHH3	B4LZH2	Uncharacterized protein.	Uncharacterized protein, isoform E.	0.588
DvirGJ12753	cni	B4LHH3	P52159	Uncharacterized protein.	Protein cornichon; Acts as cargo receptor necessary for the transportation of gurken (grk) to a transitional endoplasmic reticulum (tER) site and promotes its incorporation into coat protein complex II (COPII) vesicles. Associated with gurken, produces a signal received by torpedo resulting in a signaling pathway that first establishes posterior follicle cell fates and normal localization of the anterior and posterior determinants, later they act in a signaling event inducing dorsal follicle cell fates and regulating the dorsal-ventral pattern of egg and embryo (By similarity).	0.864
DvirGJ14160	DvirGJ12753	B4MC57	B4LHH3	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein.	0.895
DvirGJ14160	DvirGJ14897	B4MC57	B4LQE8	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein, isoform A.	0.999
DvirGJ14160	DvirGJ19371	B4MC57	A0A0Q9WJX5	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein.	0.463
DvirGJ14160	DvirGJ20463	B4MC57	D0Z795	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein, isoform B.	0.451
DvirGJ14160	DvirGJ23976	B4MC57	B4LZH2	Uncharacterized protein, isoform D; Belongs to the MAGUK family.	Uncharacterized protein, isoform E.	0.956
DvirGJ14897	DvirGJ12753	B4LQE8	B4LHH3	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.759